There have been several bugs and issues in SS31 thus far.

Alliances are having problems with:
1. Players not being in the alliance at the time of merge and login
2. Invited players going to a 'cloned' alliance with 1 member
3. Total prestige showing as 0 or a very low value

As well, it seems that inactive and banned players alike have been moved to the new server, taking up needed space.

Has anyone encountered any other bugs?

I assume evony is aware of some of these issues and is working on fixing them, but is there any timeline for a resolution?